Show simple item record

dc.contributor.authorSchmidt, Daniel J
dc.contributor.authorBrockett, Brittany
dc.contributor.authorEspinoza, Thomas
dc.contributor.authorConnell, Marilyn
dc.contributor.authorHughes, Jane M
dc.date.accessioned2018-01-23T03:40:09Z
dc.date.available2018-01-23T03:40:09Z
dc.date.issued2016
dc.identifier.issn0004-959X
dc.identifier.doi10.1071/ZO16013
dc.identifier.urihttp://hdl.handle.net/10072/100397
dc.description.abstractElusor macrurus is an endangered short-necked turtle restricted to the Mary River catchment in south-eastern Queensland. Shotgun sequencing of genomic DNA was used to generate a complete mitochondrial genome sequence for E. macrurus using the Illumina MiSeq platform. The mitogenome is 16 499 base pairs (bp) long with 37 genes arranged in the typical vertebrate order and a relatively short 918-bp control region, which does not feature extensive tandem repeats as observed in some turtles. Primers were designed to amplify a 1270-bp region that includes 81% of the typically hypervariable control region. Two haplotypes were detected in a sample of 22 wild-caught individuals from eight sites across its natural range. The Mary River turtle is a species with low mtDNA nucleotide variability relative to other Chelidae. The combination of a very restricted distribution and dramatic reduction in population size due to exploitation for the pet trade are the conditions likely to have led to very low mtDNA variability in this endangered species.
dc.description.peerreviewedYes
dc.languageEnglish
dc.language.isoeng
dc.publisherCSIRO Publishing
dc.relation.ispartofpagefrom117
dc.relation.ispartofpageto121
dc.relation.ispartofjournalAustralian Journal of Zoology
dc.relation.ispartofvolume64
dc.subject.fieldofresearchEnvironmental sciences
dc.subject.fieldofresearchOther environmental sciences not elsewhere classified
dc.subject.fieldofresearchBiological sciences
dc.subject.fieldofresearchAgricultural, veterinary and food sciences
dc.subject.fieldofresearchcode41
dc.subject.fieldofresearchcode419999
dc.subject.fieldofresearchcode31
dc.subject.fieldofresearchcode30
dc.titleComplete mitochondrial genome of the endangered Mary River turtle (Elusor macrurus) and low mtDNA variation across the species’ range
dc.typeJournal article
dc.type.descriptionC1 - Articles
dc.type.codeC - Journal Articles
gro.facultyGriffith Sciences, Griffith School of Environment
gro.hasfulltextNo Full Text
gro.griffith.authorHughes, Jane M.
gro.griffith.authorSchmidt, Daniel J.


Files in this item

FilesSizeFormatView

There are no files associated with this item.

This item appears in the following Collection(s)

  • Journal articles
    Contains articles published by Griffith authors in scholarly journals.

Show simple item record