Sfixem—graphical sequence feature display in Java

M. Chalk, Alistair; Wennerberg, Martin; L. L. Sonnhammer, Erik

doi:10.1093/bioinformatics/bth265

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Author(s)

M. Chalk, Alistair

Wennerberg, Martin

L. L. Sonnhammer, Erik

Griffith University Author(s)

Chalk, Alistair M.

Year published

2004

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Abstract

Sfixem is an sequence feature series (SFS) visualization tool implemented in Java. It is designed to visualize data from sequence analysis programs, allowing the user to view multiple sets of computationally generated analysis to assist the analysis process. SFS is used as the data exchange format. AVAILABILITY: Sfixem is available for direct usage or download for local usage at http://sfixem.cgb.ki.se. A protein sequence analysis workbench using Sfixem is available at http://sfinx.cgb.ki.se.Sfixem is an sequence feature series (SFS) visualization tool implemented in Java. It is designed to visualize data from sequence analysis programs, allowing the user to view multiple sets of computationally generated analysis to assist the analysis process. SFS is used as the data exchange format. AVAILABILITY: Sfixem is available for direct usage or download for local usage at http://sfixem.cgb.ki.se. A protein sequence analysis workbench using Sfixem is available at http://sfinx.cgb.ki.se.
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Journal Title

Bioinformatics

Volume

Issue

Publisher URI

http://bioinformatics.oxfordjournals.org/

DOI

https://doi.org/10.1093/bioinformatics/bth265

Copyright Statement

This is a pre-copy-editing, author-produced PDF of an article accepted for publication in Bioinformatics following peer review. The definitive publisher-authenticated version Bioinformatics 2004 20(15):2488-2490 is available online at: http://dx.doi.org/10.1093/bioinformatics/bth265

Subject

Bioinformatics

Publication URI

http://hdl.handle.net/10072/21744

Collection

Journal articles