Kullback-Leibler Dissimilarity of Markov Models for Phylogenetic Tree Reconstruction

Pham, TD; Crane, DI; Tannock, D; Beck, D

doi:10.1109/ISIMP.2004.1434024

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Author(s)

Pham, TD

Crane, DI

Tannock, D

Beck, D

Griffith University Author(s)

Crane, Denis I.

Year published

2004

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Abstract

We introduce the Kullback-Leibler dissimilarity measure of Markov-chain models for unaligned DNA sequences with application to the phylogenetic tree reconstruction of complete mammalian mitochondrial genomes. The tree obtained by our approach is generally in agreement with those obtained from other methods. Our proposed method is computationally efficient and very easy for computer implementation.We introduce the Kullback-Leibler dissimilarity measure of Markov-chain models for unaligned DNA sequences with application to the phylogenetic tree reconstruction of complete mammalian mitochondrial genomes. The tree obtained by our approach is generally in agreement with those obtained from other methods. Our proposed method is computationally efficient and very easy for computer implementation.
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Conference Title

PROCEEDINGS OF THE 2004 INTERNATIONAL SYMPOSIUM ON INTELLIGENT MULTIMEDIA, VIDEO AND SPEECH PROCESSING

DOI

https://doi.org/10.1109/ISIMP.2004.1434024

Copyright Statement

© 2004 IEEE. Personal use of this material is permitted. However, permission to reprint/republish this material for advertising or promotional purposes or for creating new collective works for resale or redistribution to servers or lists, or to reuse any copyrighted component of this work in other works must be obtained from the IEEE.

Publication URI

http://hdl.handle.net/10072/28195

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Conference outputs