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dc.contributor.authorA. Ruhayel, Rashaen_US
dc.contributor.authorJ. Moniodis, Josephen_US
dc.contributor.authorYang, Xiaohongen_US
dc.contributor.authorKasparkova, Janaen_US
dc.contributor.authorBrabec, Viktoren_US
dc.contributor.authorBerners-Price, Sueen_US
dc.contributor.authorP. Farrell, Nicholasen_US
dc.date.accessioned2017-05-03T15:42:27Z
dc.date.available2017-05-03T15:42:27Z
dc.date.issued2009en_US
dc.date.modified2010-08-13T07:22:43Z
dc.identifier.issn09476539en_US
dc.identifier.doi10.1002/chem.200900958en_AU
dc.identifier.urihttp://hdl.handle.net/10072/30179
dc.description.abstractReported herein is a study of the unusual 3'-3' 1,4-GG interstrand cross-link (IXL) formation in duplex DNA by a series of polynuclear platinum anticancer complexes. To examine the effect of possible preassociation through charge and hydrogen-bonding effects the closely related compounds [{trans-PtCl(NH3)2}2(孴rans-Pt(NH3)2{NH2(CH2)6NH2}2)]4+ (BBR3464, 1), [{trans-PtCl(NH3)2}2(孎H2(CH2)6NH2)]2+ (BBR3005, 2), [{trans-PtCl(NH3)2}2(孈2N(CH2)3NH2(CH2)4)]3+ (BBR3571, 3) and [{trans-PtCl(NH3)2}2{孈2N(CH2)3-N(COCF3)(CH2)4}]2+ (BBR3571-COCF3, 4) were studied. Two different molecular biology approaches were used to investigate the effect of DNA template upon IXL formation in synthetic 20-base-pair duplexes. In the "hybridisation directed" method the monofunctionally adducted top strands were hybridised with their complementary 5'-end labelled strands; after 24 h the efficiency of interstrand cross-linking in the 5'-5' direction was slightly higher than in the 3'-3' direction. The second method involved "postsynthetic modification" of the intact duplex; significantly less cross-linking was observed, but again a slight preference for the 5'-5' duplex was present. 2D [1H,?15N] HSQC NMR spectroscopy studies of the reaction of [15N]-1 with the sequence 5'-d{TATACATGTATA}2 allowed direct comparison of the stepwise formation of the 3'-3' IXL with the previously studied 5'-5' IXL on the analogous sequence 5'-d(ATATGTACATAT)2. Whereas the preassociation and aquation steps were similar, differences were evident at the monofunctional binding step. The reaction did not yield a single distinct 3'-3' 1,4-GG IXL, but numerous cross-linked adducts formed. Similar results were found for the reaction with the dinuclear [15N]-2. Molecular dynamics simulations for the 3'-3' IXLs formed by both 1 and 2 showed a highly distorted structure with evident fraying of the end base pairs and considerable widening of the minor groove.en_US
dc.description.peerreviewedYesen_US
dc.description.publicationstatusYesen_AU
dc.languageEnglishen_US
dc.language.isoen_AU
dc.publisherWiley-VCH Verlag GmbH & Co. KGaAen_US
dc.publisher.placeGermanyen_US
dc.relation.ispartofstudentpublicationNen_AU
dc.relation.ispartofpagefrom9365en_US
dc.relation.ispartofpageto9374en_US
dc.relation.ispartofissue37en_US
dc.relation.ispartofjournalChemistry - A European Journalen_US
dc.relation.ispartofvolume15en_US
dc.rights.retentionYen_AU
dc.subject.fieldofresearchBioinorganic Chemistryen_US
dc.subject.fieldofresearchcode030201en_US
dc.titleFactors affecting DNA-DNA interstrand cross-links in the antiparallel 3'-3' sense: a comparison with the 5'-5' directional isomeren_US
dc.typeJournal articleen_US
dc.type.descriptionC1 - Peer Reviewed (HERDC)en_US
dc.type.codeC - Journal Articlesen_US
gro.date.issued2009
gro.hasfulltextNo Full Text


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