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dc.contributor.authorBrownlie, J.en_US
dc.contributor.authorJohnson, N.en_US
dc.contributor.authorWhyard, S.en_US
dc.date.accessioned2017-05-03T11:46:03Z
dc.date.available2017-05-03T11:46:03Z
dc.date.issued2005en_US
dc.date.modified2010-07-09T07:48:35Z
dc.identifier.issn16174615en_US
dc.identifier.doi10.1007/s00438-005-1110-4en_AU
dc.identifier.urihttp://hdl.handle.net/10072/31816
dc.description.abstractThe maT clade of transposons is a group of transposable elements intermediate in sequence and predicted protein structure to mariner and Tc transposons, with a distribution thus far limited to a few invertebrate species. We present evidence, based on searches of publicly available databases, that the nematode Caenorhabditis briggsae has several maT-like transposons, which we have designated as CbmaT elements, dispersed throughout its genome. We also describe two additional transposon sequences that probably share their evolutionary history with the CbmaT transposons. One resembles a fold back variant of a CbmaT element, with long (380-bp) inverted terminal repeats (ITRs) that show a high degree (71%) of identity to CbmaT1. The other, which shares only the 26-bp ITR sequences with one of the CbmaT variants, is present in eight nearly identical copies, but does not have a transposase gene and may therefore be cross mobilised by a CbmaT transposase. Using PCR-based mobility assays,we show that CbmaT1 transposons are capable of excising from the C. briggsae genome. CbmaT1 excised approximately 500 times less frequently than Tcb1 in the reference strain AF16, but both CbmaT1 and Tcb1 excised at extremely high frequencies in the HK105 strain. The HK105 strain also exhibited a high frequency of spontaneous induction of unc-22 mutants, suggesting that it may be a mutator strain of C. briggsae.en_US
dc.description.peerreviewedYesen_US
dc.description.publicationstatusYesen_AU
dc.languageEnglishen_US
dc.language.isoen_AU
dc.publisherSpringer-Verlag GmbHen_US
dc.publisher.placeGermanyen_US
dc.relation.ispartofstudentpublicationNen_AU
dc.relation.ispartofpagefrom92en_US
dc.relation.ispartofpageto101en_US
dc.relation.ispartofjournalMolecular Genetics and Genomicsen_US
dc.relation.ispartofvolume273en_US
dc.rights.retentionYen_AU
dc.subject.fieldofresearchGenetics not elsewhere classifieden_US
dc.subject.fieldofresearchcode060499en_US
dc.titleThe Caenorhabditis briggsae genome contains active CbmaT1 and Tcb1 transposonsen_US
dc.typeJournal articleen_US
dc.type.descriptionC1 - Peer Reviewed (HERDC)en_US
dc.type.codeC - Journal Articlesen_US
gro.date.issued2005
gro.hasfulltextNo Full Text


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