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dc.contributor.authorRanzinger, Rene
dc.contributor.authorAoki-Kinoshita, Kiyoko F.
dc.contributor.authorCampbell, Matthew P.
dc.contributor.authorKawano, Shin
dc.contributor.authorLutteke, Thomas
dc.contributor.authorOkuda, Shujiro
dc.contributor.authorShinmachi, Daisuke
dc.contributor.authorShikanai, Toshihide
dc.contributor.authorSawaki, Hiromichi
dc.contributor.authorToukach, Philip
dc.contributor.authorMatsubara, Masaaki
dc.contributor.authorYamada, Issaku
dc.contributor.authorNarimatsu, Hisashi
dc.date.accessioned2017-07-31T02:21:32Z
dc.date.available2017-07-31T02:21:32Z
dc.date.issued2015
dc.identifier.issn1367-4811
dc.identifier.doi10.1093/bioinformatics/btu732
dc.identifier.urihttp://hdl.handle.net/10072/342827
dc.description.abstractMotivation: Over the last decades several glycomics-based bioinformatics resources and databases have been created and released to the public. Unfortunately, there is no common standard in the representation of the stored information or a common machine-readable interface allowing bioinformatics groups to easily extract and cross-reference the stored information. Results: An international group of bioinformatics experts in the field of glycomics have worked together to create a standard Resource Description Framework (RDF) representation for glycomics data, focused on glycan sequences and related biological source, publications and experimental data. This RDF standard is defined by the GlycoRDF ontology and will be used by database providers to generate common machine-readable exports of the data stored in their databases.
dc.description.peerreviewedYes
dc.languageEnglish
dc.language.isoeng
dc.publisherOxford University Press
dc.relation.ispartofpagefrom919
dc.relation.ispartofpageto925
dc.relation.ispartofissue6
dc.relation.ispartofjournalBioinformatics
dc.relation.ispartofvolume31
dc.subject.fieldofresearchBiochemistry and Cell Biology not elsewhere classified
dc.subject.fieldofresearchMathematical Sciences
dc.subject.fieldofresearchBiological Sciences
dc.subject.fieldofresearchInformation and Computing Sciences
dc.subject.fieldofresearchcode060199
dc.subject.fieldofresearchcode01
dc.subject.fieldofresearchcode06
dc.subject.fieldofresearchcode08
dc.titleGlycoRDF: An ontology to standardize glycomics data in RDF
dc.typeJournal article
dc.type.descriptionC1 - Articles
dc.type.codeC - Journal Articles
gro.hasfulltextNo Full Text
gro.griffith.authorCampbell, Matthew


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