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  • Glycomics@ExPASy: Bridging the Gap

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    Author(s)
    Mariethoz, Julien
    Alocci, Davide
    Gastaldello, Alessandra
    Horlacher, Oliver
    Gasteiger, Elisabeth
    Rojas-Macias, Miguel
    Karlsson, Niclas
    Packer, Nicolle
    Lisacek, Frederique
    Griffith University Author(s)
    Packer, Nicki
    Year published
    2018
    Metadata
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    Abstract
    Glycomics@ExPASy (https://www.expasy.org/glycomics) is the glycomics tab of ExPASy, the server of SIB Swiss Institute of Bioinformatics. It was created in 2016 to centralize web-based glycoinformatics resources developed within an international network of glycoscientists. The hosted collection currently includes mainly databases and tools created and maintained at SIB but also links to a range of reference resources popular in the glycomics community. The philosophy of our toolbox is that it should be {glycoscientist AND protein scientist}–friendly with the aim of (1) popularizing the use of bioinformatics in glycobiology ...
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    Glycomics@ExPASy (https://www.expasy.org/glycomics) is the glycomics tab of ExPASy, the server of SIB Swiss Institute of Bioinformatics. It was created in 2016 to centralize web-based glycoinformatics resources developed within an international network of glycoscientists. The hosted collection currently includes mainly databases and tools created and maintained at SIB but also links to a range of reference resources popular in the glycomics community. The philosophy of our toolbox is that it should be {glycoscientist AND protein scientist}–friendly with the aim of (1) popularizing the use of bioinformatics in glycobiology and (2) emphasizing the relationship between glycobiology and protein-oriented bioinformatics resources. The scarcity of data bridging these two disciplines led us to design tools as interactive as possible based on database connectivity to facilitate data exploration and support hypothesis building. Glycomics@ExPASy was designed, and is developed, with a long-term vision in close collaboration with glycoscientists to meet as closely as possible the growing needs of the community for glycoinformatics.
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    Journal Title
    Molecular and Cellular Proteomics
    Volume
    17
    Issue
    11
    DOI
    https://doi.org/10.1074/mcp.RA118.000799
    Copyright Statement
    This research was originally published in Molecular & Cellular Proteomics (MCP). Julien Mariethoz et al, Glycomics@ExPASy: Bridging the Gap, Molecular & Cellular Proteomics (MCP)  August 10, 2018, 17 (11) 2164-2176. Copyright the American Society for Biochemistry and Molecular Biology. Reproduced in accordance with the copyright policy of the publisher. Please refer to the journal's website for access to the definitive version.
    Subject
    Medical biochemistry - proteins and peptides (incl. medical proteomics)
    Publication URI
    http://hdl.handle.net/10072/382370
    Collection
    • Journal articles

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