Tree root interactions revealed by metabarcoding in agroforestry systems
Author(s)
Hosseini-Bai, S
Wilson, R
Hannet, G
Keller, A
Shapcott, A
Komolong, B
Farrar, MB
Wallace, HM
Year published
2022
Metadata
Show full item recordAbstract
Both cocoa and coffee are important cash crops that are usually interplanted under shade trees in agroforestry practices. Competition between roots of cash crops and neighboring trees remains a major knowledge gap. Ideal agroforestry shade trees would develop their root systems below the cocoa and coffee root zones, minimizing plant competition for nutrient uptake in the soil layers. Assessment of root development in soil remains highly challenging. Destructive excavation provides root biomass and root morphology data. However, it is not possible to identify the species of fine roots that are present in different soil zones ...
View more >Both cocoa and coffee are important cash crops that are usually interplanted under shade trees in agroforestry practices. Competition between roots of cash crops and neighboring trees remains a major knowledge gap. Ideal agroforestry shade trees would develop their root systems below the cocoa and coffee root zones, minimizing plant competition for nutrient uptake in the soil layers. Assessment of root development in soil remains highly challenging. Destructive excavation provides root biomass and root morphology data. However, it is not possible to identify the species of fine roots that are present in different soil zones in a mixed-species plantation. We selected two adjacent cocoa and coffee plantations where Canarium indicum was used as a shade tree. We used DNA meta-barcoding to determine the presence and abundance of fine roots of each species in the soil profile to a depth of 80 cm. Cocoa and coffee had higher fine-root abundance at 0-30 cm depth, whereas canarium had higher fine-root abundance at 30-80 cm depth. Our study indicated that canarium could be a suitable shade tree for cocoa and coffee. DNA metabarcoding allowed us to develop a deeper understanding of root development through the tropical soil profile and can be used to manage agroforestry systems.
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View more >Both cocoa and coffee are important cash crops that are usually interplanted under shade trees in agroforestry practices. Competition between roots of cash crops and neighboring trees remains a major knowledge gap. Ideal agroforestry shade trees would develop their root systems below the cocoa and coffee root zones, minimizing plant competition for nutrient uptake in the soil layers. Assessment of root development in soil remains highly challenging. Destructive excavation provides root biomass and root morphology data. However, it is not possible to identify the species of fine roots that are present in different soil zones in a mixed-species plantation. We selected two adjacent cocoa and coffee plantations where Canarium indicum was used as a shade tree. We used DNA meta-barcoding to determine the presence and abundance of fine roots of each species in the soil profile to a depth of 80 cm. Cocoa and coffee had higher fine-root abundance at 0-30 cm depth, whereas canarium had higher fine-root abundance at 30-80 cm depth. Our study indicated that canarium could be a suitable shade tree for cocoa and coffee. DNA metabarcoding allowed us to develop a deeper understanding of root development through the tropical soil profile and can be used to manage agroforestry systems.
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Conference Title
Acta Horticulturae
Volume
1355
Subject
Horticultural crop growth and development
Plant biology
Agroforestry
Horticultural production