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dc.contributor.authorShah, Alok K
dc.contributor.authorCao, Kim-Anh Le
dc.contributor.authorChoi, Eunju
dc.contributor.authorChen, David
dc.contributor.authorGautier, Benoit
dc.contributor.authorNancarrow, Derek
dc.contributor.authorWhiteman, David C
dc.contributor.authorBaker, Peter R
dc.contributor.authorClauser, Karl R
dc.contributor.authorChalkley, Robert J
dc.contributor.authorSaunders, Nicholas A
dc.contributor.authorBarbour, Andrew P
dc.contributor.authorJoshi, Virendra
dc.contributor.authorHill, Michelle M
dc.date.accessioned2018-01-11T01:16:33Z
dc.date.available2018-01-11T01:16:33Z
dc.date.issued2016
dc.identifier.issn2352-3409
dc.identifier.doi10.1016/j.dib.2016.03.081
dc.identifier.urihttp://hdl.handle.net/10072/99885
dc.description.abstractThis data article describes serum glycoprotein biomarker discovery and qualification datasets generated using lectin magnetic bead array (LeMBA) – mass spectrometry techniques, “Serum glycoprotein biomarker discovery and qualification pipeline reveals novel diagnostic biomarker candidates for esophageal adenocarcinoma” [1]. Serum samples collected from healthy, metaplastic Barrett׳s esophagus (BE) and esophageal adenocarcinoma (EAC) individuals were profiled for glycoprotein subsets via differential lectin binding. The biomarker discovery proteomics dataset consisting of 20 individual lectin pull-downs for 29 serum samples with a spiked-in internal standard chicken ovalbumin protein has been deposited in the PRIDE partner repository of the ProteomeXchange Consortium with the data set identifier PRIDE: http://www.ebi.ac.uk/pride/archive/projects/PXD002442. Annotated MS/MS spectra for the peptide identifications can be viewed using MS-Viewer (〈http://prospector2.ucsf.edu/prospector/cgi-bin/msform.cgi?form=msviewer〉) using search key “jn7qafftux”. The qualification dataset contained 6-lectin pulldown-coupled multiple reaction monitoring-mass spectrometry (MRM-MS) data for 41 protein candidates, from 60 serum samples. This dataset is available as a supplemental files with the original publication [1].
dc.description.peerreviewedYes
dc.languageEnglish
dc.language.isoeng
dc.publisherElsevier
dc.relation.ispartofpagefrom1058
dc.relation.ispartofpageto1062
dc.relation.ispartofjournalData in Brief
dc.relation.ispartofvolume7
dc.subject.fieldofresearchClinical Sciences not elsewhere classified
dc.subject.fieldofresearchcode110399
dc.titleGlyco-centric lectin magnetic bead array (LeMBA) - proteomics dataset of human serum samples from healthy, Barrett's esophagus and esophageal adenocarcinoma individuals
dc.typeJournal article
dc.type.descriptionC1 - Articles
dc.type.codeC - Journal Articles
dcterms.licensehttp://creativecommons.org/licenses/by/4.0/
dc.description.versionVersion of Record (VoR)
gro.rights.copyright© 2016TheAuthors.PublishedbyElsevierInc.ThisisanopenaccessarticleundertheCCBYlicense (http://creativecommons.org/licenses/by/4.0/).
gro.hasfulltextFull Text
gro.griffith.authorChen, David


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