The minimum information required for a glycomics experiment (MIRAGE) project: Improving the standards for reporting mass-spectrometry-based glycoanalytic data

Loading...
Thumbnail Image
File version

Version of Record (VoR)

Author(s)
Kolarich, Daniel
Rapp, Erdmann
Struwe, Weston B
Haslam, Stuart M
Zaia, Joseph
McBride, Ryan
Agravat, Sanjay
Campbell, Matthew P
Kato, Masaki
Ranzinger, Rene
Kettner, Carsten
York, William S
Griffith University Author(s)
Primary Supervisor
Other Supervisors
Editor(s)
Date
2013
Size
File type(s)
Location
License
Abstract

The MIRAGE guidelines are being developed in response to a critical need in the glycobiology community to clarify glycoanalytic results so that they are more readily evaluated (in terms of their scope and depth) and to facilitate the reproduction of important results in the laboratory. The molecular and biological complexity of the glycosylation process makes thorough reporting of the results of a glycomics experiment a highly challenging endeavor. The resulting data specify the identity and quantity of complex structures, the precise molecular features of which are sometimes inferred using prior knowledge, such as familiarity with a particular biosynthetic mechanism. Specifying the exact methods and assumptions that were used to assign and quantify reported structures allows the interested scientist to appreciate the scope and depth of the analysis. Mass spectrometry (MS) is the most widely used tool for glycomics experiments. The interpretation and reproducibility of MS-based glycomics data depend on comprehensive meta-data describing the instrumentation, instrument setup, and data acquisition protocols. The MIRAGE guidelines for MS-based glycomics have been designed to facilitate the collection and sharing of this critical information in order to assist the glycoanalyst in generating data sets with maximum information content and biological relevance.

Journal Title

Molecular and Cellular Proteomics

Conference Title
Book Title
Edition
Volume

12

Issue

4

Thesis Type
Degree Program
School
Publisher link
Patent number
Funder(s)
Grant identifier(s)
Rights Statement
Rights Statement

This research was originally published in Molecular & Cellular Proteomics (MCP). Kolarich et al, The minimum information required for a glycomics experiment (MIRAGE) project: Improving the standards for reporting mass-spectrometry-based glycoanalytic data, Molecular & Cellular Proteomics (MCP)  2013; 12: 991-995. Copyright the American Society for Biochemistry and Molecular Biology. Reproduced in accordance with the copyright policy of the publisher. Please refer to the journal's website for access to the definitve version.

Item Access Status
Note
Access the data
Related item(s)
Subject

Analytical chemistry not elsewhere classified

Persistent link to this record
Citation
Collections