Modelling steroidogenesis: A framework model to support hypothesis generation and testing across endocrine studies

Loading...
Thumbnail Image
File version

Version of Record (VoR)

Author(s)
O'Hara, L
O'Shaughnessy, PJ
Freeman, TC
Smith, LB
Griffith University Author(s)
Primary Supervisor
Other Supervisors
Editor(s)
Date
2018
Size
File type(s)
Location
Abstract

Objective: Steroid hormones are responsible for the control of a wide range of physiological processes such as development, growth, reproduction, metabolism, and aging. Because of the variety of enzymes, substrates and products that take part in steroidogenesis and the compartmentalisation of its constituent reactions, it is a complex process to visualise and document. One of the goals of systems biology is to quantitatively describe the behaviour of complex biological systems that involve the interaction of many components. This can be done by representing these interactions visually in a pathway model and then optionally constructing a mathematical model of the interactions. Results: We have used the modified Edinburgh Pathway Notation to construct a framework diagram describing human steroidogenic pathways, which will be of use to endocrinologists. To demonstrate further utility, we show how such models can be parameterised with empirical data within the software Graphia Professional, to recapitulate specific examples of steroid hormone production, and also to mimic gene knockout. These framework models support in silico hypothesis generation and testing with utility across endocrine endpoints, with significant potential to reduce costs, time and animal numbers, whilst informing the design of planned studies.

Journal Title

BMC Research Notes

Conference Title
Book Title
Edition
Volume

11

Issue

1

Thesis Type
Degree Program
School
Publisher link
Patent number
Funder(s)
Grant identifier(s)
Rights Statement
Rights Statement

© The Author(s) 2018. This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.

Item Access Status
Note
Access the data
Related item(s)
Subject

Analytical biochemistry

Diagram

Model

Steroidogenesis

Persistent link to this record
Citation

O'Hara, L; O'Shaughnessy, PJ; Freeman, TC; Smith, LB, Modelling steroidogenesis: A framework model to support hypothesis generation and testing across endocrine studies, BMC Research Notes, 2018, 11 (1), pp. 252

Collections